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Slc2a13, a risk gene for Parkinson’s disease associated with Snca and Lrrk2

JW. Li, GX. Zhang, T. Wang, ZC. Lin, N. Xiong (Wuhan, China)

Meeting: 2024 International Congress

Abstract Number: 1618

Keywords: Dopaminergic neurons, Leucine-rich repeat kinase 2(LRRK2), Parkinson’s

Category: Parkinson's Disease: Genetics

Objective: To exploit the potential function of the risk gene Slc2a13 in PD progression.

Background: 越来越多的证据证实了总体遗传位点和候选基因对帕金森病的贡献,以及两个最确定的风险基因,即α-突触核蛋白(Snca)和富含亮氨酸的重复激酶2(Lrrk2)。Slc2a13 编码哺乳动物肌醇转运蛋白,被认为是一种群体依赖性风险基因。越来越多的证据支持这样一种观点,即 Slc2a13 活性的改变强调了 PD 的发展。剖析转运蛋白活性降低如何导致多巴胺能神经元变性和丧失,可能会进一步加深我们对功能的理解。

Method: A total of 338 cases with sporadic PD and 252 healthy ethnically matched control subjects, all Han Chinese, were enrolled in central China. Genomic DNA was extracted from peripheral blood using a whole-blood DNA extraction kit for next-generation sequencing. Male mice were randomly divided into 4 groups and received the intraperitoneal injection of saline or MPTP for consecutive 1, 3, 7 days. Molecular biology experiments were finished after the behavior tests and sacrifice.

Results: We first did a seed association study in a Han cohort from central China (n=590). Twenty-one SNP markers were chosen based on the selection criteria. Table 1 showed rs1994090 in Slc2a13 had the most significant association in the gender-mixed model (nominal P=6.8×10-8, OR=3.43; P=2.5×10-4, OR=3.11 for males and P=5.0×10-4, OR=3.95 for females).

Immunofluorescence images of mouse brain demonstrated the coexpressions of SLC2A13 with SNCA and LRRK2 in nigral dopamine neurons (Figure 1a,b),  which was consistent with RNA-scope figures (Figure 1b,d). We also investigated whether altered SLC2A13 activity was associated with PD in a MPTP-induced mouse model. Cellular staining and behaviour tests results showed neurodegeneration (Figure 2a-c). During the seven days, SLC2A13 expression gradually decreased(Figure 2d,e) and statistically, the decrease was detected on Day1, a day earlier than the movement manifestations (Figure 2f,g).

Conclusion: Slc2a13, confers a risk gene for Asian PD, co-expressed with the interacting and endogenous risk genes Snca and Lrrk2, is associated with dopamine neurons loss and abnormal motor function.

Allelic associations with PD in central China

Allelic associations with PD in central China

Co-expressions of SLC2A13 with SNCA and LRRK2

Co-expressions of SLC2A13 with SNCA and LRRK2

Down-regulation of SLC2A13 in a PD mouse model

Down-regulation of SLC2A13 in a PD mouse model

References: Rizig, M. et al. Identification of genetic risk loci and causal insights associated with Parkinson’s disease in African and African admixed populations: a genome-wide
association study. Lancet Neurol 22, 1015-1025 (2023).
Farrow, S.L. et al. Establishing gene regulatory networks from Parkinson’s disease risk loci. Brain 145, 2422-2435 (2022).
Li, C. et al. Mutation analysis of seven SLC family transporters for early-onset Parkinson’s disease in Chinese population. Neurobiol Aging 103, 152.e1-152.e6 (2021).

To cite this abstract in AMA style:

JW. Li, GX. Zhang, T. Wang, ZC. Lin, N. Xiong. Slc2a13, a risk gene for Parkinson’s disease associated with Snca and Lrrk2 [abstract]. Mov Disord. 2024; 39 (suppl 1). https://www.mdsabstracts.org/abstract/slc2a13-a-risk-gene-for-parkinsons-disease-associated-with-snca-and-lrrk2/. Accessed June 14, 2025.
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